Stem-loop cbn-mir-64c-1

Accession

MI0024856

Description

Caenorhabditis brenneri cbn-mir-64c-1 precursor miRNA

Gene family

MIPF0000295; mir-64

Sequence

UAUGACACAUAUGCGUAGUUGGAccauccaacaccauaggauccaaccacaauaugugugauagu
(((.((((((((..((.((((((...(((.........))))))))).)).)))))))).)))..

Structure

--   G        GC  A      cca   aac 
  UAU ACACAUAU  GU GUUGGA   ucc   a
  ||| ||||||||  || ||||||   |||   c
  aua uguguaua  ca caaccu   agg   c
ug   g        -a  c      ---   aua 

Annotation confidence Not enough data

Genome context

Cbre_Contig230: 84417-84481 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from cbn-mir-64c-1

Mature cbn-miR-64c

• Accession: MIMAT0029705
• Description: Caenorhabditis brenneri cbn-miR-64c mature miRNA
• Sequence: 1 - UAUGACACAUAUGCGUAGUUGGA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508