Stem-loop cbn-mir-82

Accession

MI0024844

Description

Caenorhabditis brenneri cbn-mir-82 precursor miRNA

Gene family

MIPF0000154; mir-81

Sequence

agguucucacugugaucugcagaguauaaagccuacaucUGAGAUCAUCGUGAAAGCCAGU
.((((.((((.(((((((.(((((((.......))).))))))))))).)))).))))...

Structure

--a    c    u       g    -   ua 
   gguu ucac gugaucu caga gua  a
   |||| |||| ||||||| |||| |||  a
   CCGA AGUG UACUAGA GUcu cau  g
UGA    A    C       -    a   cc 

Annotation confidence Not enough data

Genome context

Cbre_Contig0: 976053-976113 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cbn-mir-82

Mature cbn-miR-82

• Accession: MIMAT0029694
• Description: Caenorhabditis brenneri cbn-miR-82 mature miRNA
• Sequence: 40 - UGAGAUCAUCGUGAAAGCCAGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508