Stem-loop cbn-mir-58a-2

Accession

MI0024843

Description

Caenorhabditis brenneri cbn-mir-58a-2 precursor miRNA

Gene family

MIPF0000282; mir-58

Sequence

ugcccuacucuucgcaucucaucacuucguccgccaauauaaggaUGAGAUCGUUCAGUACGGCAAU
((((.((((...((.((((((((.(((.............)))))))))))))...)))).))))..

Structure

--    c    cuu  c        a   cgucc 
  ugcc uacu   cg aucucauc cuu     g
  |||| ||||   || |||||||| |||     c
  ACGG AUGA   GC UAGAGUag gaa     c
UA    C    CUU  -        -   uauaa 

Annotation confidence Not enough data

Genome context

Cbre_Contig688: 38441-38507 [-]

Mature cbn-miR-58a

• Accession: MIMAT0029693
• Description: Caenorhabditis brenneri cbn-miR-58a mature miRNA
• Sequence: 46 - UGAGAUCGUUCAGUACGGCAAU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508