miRBase entry: cbn-mir-81

Stem-loop cbn-mir-81


Accession
MI0024841
Description
Caenorhabditis brenneri cbn-mir-81 precursor miRNA
Gene family
MIPF0000154; mir-81


Sequence

cgguuuucaccuugaucugagagcuaucugaaugcuaucUGAGAUCAUCGUGAAAGCUAGU
.(((((((((..((((((.(((((.........))..))).))))))..)))))))))...

Structure
--c         cu      g   --  uau 
   gguuuucac  ugaucu aga  gc   c
   |||||||||  |||||| |||  ||   u
   UCGAAAGUG  ACUAGA Ucu  cg   g
UGA         CU      G   au  uaa 


Annotation confidence Not enough data
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Genome context
Cbre_Contig0: 979011-979071 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cbn-mir-81
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cbn-miR-81

Accession MIMAT0029692
Description Caenorhabditis brenneri cbn-miR-81 mature miRNA
Sequence 40 - UGAGAUCAUCGUGAAAGCUAGU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508