Stem-loop cbn-mir-241-1

Accession

MI0024831

Description

Caenorhabditis brenneri cbn-mir-241-1 precursor miRNA

Gene family

MIPF0000248; mir-241

Sequence

AGAGGUAGGUGCGAGAAAUGAcgggcaucgugcaaaucguucauugucucccagcuacuucaac
.(((((((.((.(((((((((((((((...)))...))).))))).)))).)).)))))))...

Structure

--A       G  C    -     -   ---   u 
   GAGGUAG UG GAGA AAUGA cgg   gca  
   ||||||| || |||| ||||| |||   ||| c
   cuucauc ac cucu uuacu gcu   cgu  
caa       g  c    g     u   aaa   g 

Annotation confidence Not enough data

Genome context

Cbre_Contig123: 224987-225050 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cbn-mir-241-1

Mature cbn-miR-241

• Accession: MIMAT0029685
• Description: Caenorhabditis brenneri cbn-miR-241 mature miRNA
• Sequence: 1 - AGAGGUAGGUGCGAGAAAUGA - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508