miRBase entry: cbn-mir-7633

Stem-loop cbn-mir-7633


Accession
MI0024820
Description
Caenorhabditis brenneri cbn-mir-7633 precursor miRNA


Sequence

cgagaauucugguacggggcaacuguaauguaagaaacaauaagUUGCCCAAGCAGAAUUUUCGAA
(((((((((((.(...((((((((....(((.....)))...)))))))).).)))))))))))..

Structure
--           g acg        guaa   a 
  cgagaauucug u   gggcaacu    ugu a
  ||||||||||| |   ||||||||    ||| g
  GCUUUUAAGAC A   CCCGUUga    aca a
AA           G --A        -aua   a 


Annotation confidence Not enough data
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Genome context
Cbre_Contig91: 357071-357136 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from cbn-mir-7633
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cbn-miR-7633

Accession MIMAT0029676
Description Caenorhabditis brenneri cbn-miR-7633 mature miRNA
Sequence 45 - UUGCCCAAGCAGAAUUUUCGAA - 66
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508