miRBase entry: cbn-mir-7621b

Stem-loop cbn-mir-7621b


Accession
MI0024805
Description
Caenorhabditis brenneri cbn-mir-7621b precursor miRNA


Sequence

agcagguuauuacuuuguugaugaguccaaaaauaauguucaUCAACCGGAAUAACACGCUCA
(((..((((((.((..(((((((((.............))))))))).))))))))..)))..

Structure
--   ag      a  uu         uccaa 
  agc  guuauu cu  guugaugag     a
  |||  |||||| ||  |||||||||     a
  UCG  CAAUAA GG  CAACUacuu     a
AC   CA      -  -C         guaau 


Annotation confidence Not enough data
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Genome context
Cbre_Contig21: 489597-489659 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cbn-mir-7621b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cbn-miR-7621b

Accession MIMAT0029661
Description Caenorhabditis brenneri cbn-miR-7621b mature miRNA
Sequence 43 - UCAACCGGAAUAACACGCUCA - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508