miRBase entry: cbn-mir-7621a

Stem-loop cbn-mir-7621a


Accession
MI0024804
Description
Caenorhabditis brenneri cbn-mir-7621a precursor miRNA


Sequence

agcuggucuuuccuuguugauaaguccacaaacagcgucuaUCAACAGGCCAAGAUCAGCUCU
((((((((((..((((((((((.(.((.......).).)))))))))))..))))))))))..

Structure
--          uc          a u - ac 
  agcuggucuu  cuuguugaua g c c  a
  ||||||||||  |||||||||| | | |  a
  UCGACUAGAA  GGACAACUau c g g  a
UC          CC          - u c ac 


Annotation confidence Not enough data
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Genome context
Cbre_Contig21: 486385-486447 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cbn-mir-7621a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cbn-miR-7621a

Accession MIMAT0029660
Description Caenorhabditis brenneri cbn-miR-7621a mature miRNA
Sequence 42 - UCAACAGGCCAAGAUCAGCUCU - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508