miRBase entry: crm-mir-2229a

Stem-loop crm-mir-2229a


Accession
MI0024787
Description
Caenorhabditis remanei crm-mir-2229a precursor miRNA
Gene family
MIPF0001694; mir-2229


Sequence

acaguuccaacaguucuuuccacacucacaaagaagcguUGAAAGACUAUUCGGGCUGGGA
.((((((.((.(((.(((((.((.((........)).)).)))))))).)).))))))...

Structure
--a      c  c   u     c  a  cac 
   caguuc aa agu cuuuc ac cu   a
   |||||| || ||| ||||| || ||    
   GUCGGG UU UCA GAAAG ug ga   a
AGG      C  A   -     U  c  aga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Crem_Contig0: 3141113-3141173 [+]

Database links

Mature crm-miR-2229a

Accession MIMAT0029648
Description Caenorhabditis remanei crm-miR-2229a mature miRNA
Sequence 40 - UGAAAGACUAUUCGGGCUGGGA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508