miRBase entry: crm-mir-1824

Stem-loop crm-mir-1824

Accession

MI0024781

Description

Caenorhabditis remanei crm-mir-1824 precursor miRNA

Sequence

acgaagcuccccacacugcgacucgucuauugaagaaauagUGGCAGUUCGCGAGCUUCGAGA
.((((((((.....(((((.(((..(((.....)))...))).)))))....))))))))...

Structure

--a        cccac     g   -cg   a 
   cgaagcuc     acugc acu   ucu u
   ||||||||     ||||| |||   ||| u
   GCUUCGAG     UGACG Uga   aga g
AGA        -CGCU     G   uaa   a

Annotation confidence Not enough data

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Genome context

Crem_Contig22: 611625-611687 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from crm-mir-1824

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature crm-miR-1824

Accession	MIMAT0029642
Description	Caenorhabditis remanei crm-miR-1824 mature miRNA
Sequence	42 - UGGCAGUUCGCGAGCUUCGAGA - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508