miRBase entry: crm-mir-58c

Stem-loop crm-mir-58c


Accession
MI0024776
Description
Caenorhabditis remanei crm-mir-58c precursor miRNA


Sequence

ucuggcuuauugauuggucuccuaccacuuuuuggauaUGAGAUCAUUCGAUGAGCCCAGA
(((((((((((((.(((((((.(((((.....))).)).))))))).)))))))).)))))

Structure
     -        u       c  -   c 
ucugg cuuauuga uggucuc ua cca u
||||| |||||||| ||||||| || ||| u
AGACC GAGUAGCU ACUAGAG au ggu u
     C        U       U  a   u 


Annotation confidence Not enough data
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Genome context
Crem_Contig279: 61187-61247 [+]

Database links

Mature crm-miR-58c

Accession MIMAT0029637
Description Caenorhabditis remanei crm-miR-58c mature miRNA
Sequence 39 - UGAGAUCAUUCGAUGAGCCCAGA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508