miRBase entry: crm-mir-240

Stem-loop crm-mir-240

Accession

MI0024768

Description

Caenorhabditis remanei crm-mir-240 precursor miRNA

Sequence

cgggaguuucguggccugaaugcgugaacgcuugugcuuuagcAUACUGGCCCCCAAAUUUUCGCU
(((((((((.(.((((.(.((((.((((.((....)))))))))).).)))).).)))))))))..

Structure

--         c u    u a    g    c  u 
  cgggaguuu g ggcc g augc ugaa gc u
  ||||||||| | |||| | |||| |||| ||  
  GCUUUUAAA C CCGG C UAcg auuu cg g
UC         C C    U A    -    -  u

Annotation confidence Not enough data

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Genome context

Crem_Contig0: 181528-181593 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from crm-mir-240

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature crm-miR-240

Accession	MIMAT0029629
Description	Caenorhabditis remanei crm-miR-240 mature miRNA
Sequence	44 - AUACUGGCCCCCAAAUUUUCGCU - 66
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508