miRBase entry: crm-mir-7608

Stem-loop crm-mir-7608


Accession
MI0024765
Description
Caenorhabditis remanei crm-mir-7608 precursor miRNA


Sequence

AACGUUUCAUUUCUGUACAAAACUuaucaagaugcaucaguuuguacuaauggaacgaucu
..(((((((((...(((((((.((.((((...)).)).))))))))).)))))))))....

Structure
--AA         UCU       A  u  -  a 
    CGUUUCAUU   GUACAAA CU au ca  
    |||||||||   ||||||| || || || g
    gcaagguaa   cauguuu ga ua gu  
ucua         --u       -  c  c  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Crem_Contig22: 614482-614542 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from crm-mir-7608
Name Accession Chromosome Start End Strand Confidence




Database links

Mature crm-miR-7608

Accession MIMAT0029626
Description Caenorhabditis remanei crm-miR-7608 mature miRNA
Sequence 1 - AACGUUUCAUUUCUGUACAAAACU - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508