Stem-loop cbr-mir-2

Accession

MI0024743

Description

Caenorhabditis briggsae cbr-mir-2 precursor miRNA

Gene family

MIPF0000049; mir-2

Literature search

1 open access papers mention cbr-mir-2
(5 sentences)

Sequence

ccgucaaagugguguguguuaugccgcauaagugaacuucuuuucggaaguuuugguucaUAUCACAGCCAGCUUUGAUGUGC
.((((((((((((.((((.(((((((.......((((((((....)))))))))))..)))).)))))))).))))))))...

Structure

--c        -    g    u    --   cauaagu        u 
   cgucaaag uggu ugug uaug  ccg       gaacuucu u
   |||||||| |||| |||| ||||  |||       ||||||||  
   GUAGUUUC ACCG ACAC AUac  ggu       uuugaagg u
CGU        G    -    U    uu   -------        c 

Annotation confidence Not enough data

Genome context

chrI: 2714104-2714186 [-]

Mature cbr-miR-2

• Accession: MIMAT0029606
• Description: Caenorhabditis briggsae cbr-miR-2 mature miRNA
• Sequence: 61 - UAUCACAGCCAGCUUUGAUGUGC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508