miRBase entry: cbr-mir-64c

Stem-loop cbr-mir-64c

Accession

MI0024740

Description

Caenorhabditis briggsae cbr-mir-64c precursor miRNA

Sequence

CAUGACACACUGGCUGGUCUGGAaugauuucggcuccuccgguccgcccgagugccacgaa
..((.(((.(.(((.((.(((((..((.......)).))))).))))).).))).))....

Structure

--CA  A   A U   U  U     au  uu 
    UG CAC C GGC GG CUGGA  ga  u
    || ||| | ||| || |||||  ||  c
    ac gug g ccg cc ggccu  cu  g
aagc  c   a c   -  u     -c  cg

Annotation confidence Not enough data

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Genome context

chrIII: 869360-869420 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from cbr-mir-64c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbr-miR-64c

Accession	MIMAT0029603
Description	Caenorhabditis briggsae cbr-miR-64c mature miRNA
Sequence	1 - CAUGACACACUGGCUGGUCUGGA - 23
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508