miRBase entry: ipu-mir-7573

Stem-loop ipu-mir-7573


Accession
MI0024708
Description
Ictalurus punctatus ipu-mir-7573 precursor miRNA

Literature search
1 open access papers mention ipu-mir-7573
(2 sentences)

Sequence

AGGCUGAGCCUGAUGGCACUGAGguggcugauaaaaucgccuaccucauuggccugaacucagccgacaugc
.(((((((......(((..(((((((((.(((...)))))).))))))...)))....))))))).......

Structure
------A       CCUGAU   -AC      -   u   a 
       GGCUGAG      GGC   UGAGgu ggc gau  
       |||||||      |||   |||||| ||| ||| a
       ccgacuc      ccg   acucca ccg cua  
cguacag       --aagu   guu      u   -   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-7573

Accession MIMAT0029572
Description Ictalurus punctatus ipu-miR-7573 mature miRNA
Sequence 1 - AGGCUGAGCCUGAUGGCACUGAG - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174