miRBase entry: ipu-mir-7562

Stem-loop ipu-mir-7562


Accession
MI0024695
Description
Ictalurus punctatus ipu-mir-7562 precursor miRNA

Literature search
1 open access papers mention ipu-mir-7562
(1 sentences)

Sequence

CACACACACUCAUGAACACACAcugugcuucuuaauggguguguuuaugcguguuugucuc
.(((.((((.(((((((((((.((((........))))))))))))))).)))).)))...

Structure
--C   C    U           A    gcu 
   ACA ACAC CAUGAACACAC cugu   u
   ||| |||| ||||||||||| ||||    
   ugu ugug guauuugugug ggua   c
cuc   u    c           -    auu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-7562

Accession MIMAT0029559
Description Ictalurus punctatus ipu-miR-7562 mature miRNA
Sequence 1 - CACACACACUCAUGAACACACA - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174