miRBase entry: ipu-mir-29a

Stem-loop ipu-mir-29a


Accession
MI0024673
Description
Ictalurus punctatus ipu-mir-29a precursor miRNA
Gene family
MIPF0000009; mir-29

Literature search
1 open access papers mention ipu-mir-29a
(1 sentences)

Sequence

ACUGAUUUCCUCUGGUGUUcagaguggacuggguuuuucuagcaccauuugaaaucggucg
(((((((((...(((((((.((((.((((...)))))))))))))))...)))))))))..

Structure
--         CUC       c    u    u 
  ACUGAUUUC   UGGUGUU agag ggac  
  |||||||||   ||||||| |||| |||| g
  uggcuaaag   accacga ucuu uuug  
gc         uuu       -    -    g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-29a

Accession MIMAT0029537
Description Ictalurus punctatus ipu-miR-29a mature miRNA
Sequence 1 - ACUGAUUUCCUCUGGUGUU - 19
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174