miRBase entry: ipu-mir-196d-2

Stem-loop ipu-mir-196d-2


Accession
MI0024546
Description
Ictalurus punctatus ipu-mir-196d-2 precursor miRNA
Gene family
MIPF0000031; mir-196


Sequence

ccaagaaacaaagacaacugcuaagugauuUAGGUAGUUUUAUGUUGUUGGGC
((((..((((.(((..((((((.((....)).))))))))).)))).))))..

Structure
--    ga    a   ca      a  u 
  ccaa  aaca aga  acugcu ag g
  ||||  |||| |||  |||||| ||  
  GGUU  UUGU UUU  UGAUGG Uu a
CG    -G    A   --      A  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-196d

Accession MIMAT0029449
Description Ictalurus punctatus ipu-miR-196d mature miRNA
Sequence 31 - UAGGUAGUUUUAUGUUGUUGGGC - 53
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174