miRBase entry: ipu-let-7d-1

Stem-loop ipu-let-7d-1


Accession
MI0024445
Description
Ictalurus punctatus ipu-let-7d-1 precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
1 open access papers mention ipu-let-7d-1
(5 sentences)

Sequence

UGAGGUAGUUGGUUGUAUGGUUuugcauaauaaacagcccggaguuaacuguacaaccuucuagcuuucc
.(((.(((..((((((((((((..((.................)).))))))))))))..))).)))...

Structure
--U   G   UU            uu  auaauaa 
   GAG UAG  GGUUGUAUGGUU  gc       a
   ||| |||  ||||||||||||  ||       c
   uuc auc  ccaacaugucaa  ug       a
ccu   g   uu            -u  aggcccg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-let-7d

Accession MIMAT0029377
Description Ictalurus punctatus ipu-let-7d mature miRNA
Sequence 1 - UGAGGUAGUUGGUUGUAUGGUU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174