Stem-loop lja-MIR7527

Accession

MI0024409

Description

Lotus japonicus lja-MIR7527 precursor miRNA

Sequence

ccCAUGGCGUGCAAAACCCCACGCgcguggaaguuauaaccgcuuggaucuacaugcgugcgguucacgcgcuaggg
(((.(((((((...((((.((((((.((((((((.......)))....))))).)))))).))))..))))))))))

Structure

   A       CAA    C      c     ----   ua 
ccC UGGCGUG   AACC CACGCg gugga    agu  u
||| |||||||   |||| |||||| |||||    |||  a
ggg aucgcgc   uugg gugcgu caucu    ucg  a
   -       -ac    c      a     aggu   cc 

Annotation confidence Not enough data

Genome context

Chr4: 34695281-34695357 [-]

Mature lja-miR7527

• Accession: MIMAT0029350
• Description: Lotus japonicus lja-miR7527 mature miRNA
• Sequence: 3 - CAUGGCGUGCAAAACCCCACGC - 24
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23071252
   Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus
   "De Luis A, Markmann K, Cognat V, Holt DB, Charpentier M, Parniske M, Stougaard J, Voinnet O"
   "Plant Physiol (2012) 160:2137-2154