Stem-loop mes-MIR535a

Accession

MI0024342

Description

Manihot esculenta mes-MIR535a precursor miRNA

Gene family

MIPF0000136; MIR535

Literature search

4 open access papers mention mes-MIR535a
(8 sentences)

Sequence

gcuuugacauuauugguUGACAACGAGAGAGAGCACGUuugucagcauuuuguguuagggucaugacuguuuacaagcgugcucccuaucguugucauaaaugugcucaaagc
((((((((((.(((...(((((((((.((.((((((((((((.((((..(((((.......))))).)))).)))))))))))).)).)))))))))..)))))).)))))))

Structure

       -   u   ggu         G  A            c    uu     uu 
gcuuuga cau auu   UGACAACGA AG GAGCACGUuugu agca  uugug  a
||||||| ||| |||   ||||||||| || |||||||||||| ||||  |||||  g
cgaaacu gug uaa   acuguugcu uc cucgugcgaaca uugu  aguac  g
       c   -   -au         a  c            u    -c     ug 

Annotation confidence Not enough data

Genome context

scaffold05782: 22903-23015 [-]

Mature mes-miR535a

• Accession: MIMAT0029300
• Description: Manihot esculenta mes-miR535a mature miRNA
• Sequence: 18 - UGACAACGAGAGAGAGCACGU - 38
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269