Stem-loop mes-MIR397

Accession

MI0024321

Description

Manihot esculenta mes-MIR397 precursor miRNA

Gene family

MIPF0000120; MIR397

Literature search

4 open access papers mention mes-MIR397
(8 sentences)

Sequence

ucaUUUGAGUGCAGCGUUGAUGAauuuccuacaauuuucuaagauuuuaauuuuguugaaggauuuuaccagcgccgcacuuaauca
....((((((((.((((((.((((..((((.((((...................)))).)))).)))).)))))).))))))))...

Structure

ucaU        A      A    uu    a    uuucuaag 
    UUGAGUGC GCGUUG UGAa  uccu caau        a
    |||||||| |||||| ||||  |||| ||||        u
    aauucacg cgcgac auuu  agga guug        u
-acu        c      c    -u    a    uuuuaauu 

Annotation confidence Not enough data

Genome context

scaffold05338: 120026-120112 [-]

Mature mes-miR397

• Accession: MIMAT0029279
• Description: Manihot esculenta mes-miR397 mature miRNA
• Sequence: 4 - UUUGAGUGCAGCGUUGAUGA - 23
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269