miRBase entry: mes-MIR395d

Stem-loop mes-MIR395d


Accession
MI0024313
Description
Manihot esculenta mes-MIR395d precursor miRNA
Gene family
MIPF0000016; MIR395

Literature search
6 open access papers mention mes-MIR395d
(10 sentences)

Sequence

gucaggugucuccuggaguuccccugaucacuucacuggggugggcuacaguuuccaggaaacccuaCUGAAGUGUUUGGGGGAACUCcgguggccauuugac
((((((((.((.(((((((((((((((.(((((((.((((((...((.........))...)))))).))))))).))))))))))))))).)).))))))))

Structure
        u  c               u       c      ggg  aca 
gucaggug cu cuggaguuccccuga cacuuca uggggu   cu   g
|||||||| || ||||||||||||||| ||||||| ||||||   ||   u
caguuuac gg ggcCUCAAGGGGGUU GUGAAGU auccca   ga   u
        c  u               U       C      aag  ccu 


Annotation confidence Not enough data
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Genome context
scaffold01497: 23497-23599 [+]

Database links

Mature mes-miR395d

Accession MIMAT0029271
Description Manihot esculenta mes-miR395d mature miRNA
Sequence 68 - CUGAAGUGUUUGGGGGAACUC - 88
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269