miRBase entry: mes-MIR167f

Stem-loop mes-MIR167f


Accession
MI0024248
Description
Manihot esculenta mes-MIR167f precursor miRNA
Gene family
MIPF0000023; MIR167_1

Literature search
5 open access papers mention mes-MIR167f
(20 sentences)

Sequence

ucguguaccacuagcagaUGAAGCUGCCAGCAUGAUCUGAgcuuucguuaauuauccuauacauauggauauauccagaggagagauuagaucauguggcugcuucaccuguugaugguagcauga
((((((((((.((((((.((((((.((((.((((((((((.(((((.((...(((((.........)))))......)).))))).)))))))))))))).)))))).)))))).)))).))))))

Structure
      -    c      a      U    G          g     g  ---aau     uau 
ucgugu acca uagcag UGAAGC GCCA CAUGAUCUGA cuuuc uu      uaucc   a
|||||| |||| |||||| |||||| |||| |||||||||| ||||| ||      |||||   c
aguacg uggu guuguc acuucg cggu guacuagauu gagag ag      auagg   a
      a    a      c      u    -          a     g  accuau     uau 


Annotation confidence Not enough data
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Genome context
scaffold03614: 2928186-2928311 [-]

Database links

Mature mes-miR167f

Accession MIMAT0029206
Description Manihot esculenta mes-miR167f mature miRNA
Sequence 19 - UGAAGCUGCCAGCAUGAUCUGA - 40
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269