miRBase entry: mes-MIR160a

Stem-loop mes-MIR160a


Accession
MI0024221
Description
Manihot esculenta mes-MIR160a precursor miRNA
Gene family
MIPF0000032; MIR160

Literature search
7 open access papers mention mes-MIR160a
(23 sentences)

Sequence

aUGCCUGGCUCCCUGUAUGCCAcaagcuagaguucaaucccaucaguggacuggcugucgccgguggcgugcgaggagccaagcau
((((.(((((((.((((((((((..((.(.(((.((.((((....).))).))))).).))..)))))))))).))))))).))))

Structure
    C       C          aa  u g   u  a   - a 
aUGC UGGCUCC UGUAUGCCAc  gc a agu ca ucc c u
|||| ||||||| ||||||||||  || | ||| || ||| |  
uacg accgagg gcgugcggug  cg u ucg gu agg g c
    a       a          gc  c g   -  c   u a 


Annotation confidence Not enough data
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Genome context
scaffold10183: 164216-164301 [-]

Database links

Mature mes-miR160a

Accession MIMAT0029179
Description Manihot esculenta mes-miR160a mature miRNA
Sequence 2 - UGCCUGGCUCCCUGUAUGCCA - 22
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269