miRBase entry: oan-mir-216b

Stem-loop oan-mir-216b


Accession
MI0024098
Description
Ornithorhynchus anatinus oan-mir-216b precursor miRNA
Gene family
MIPF0000054; mir-216


Sequence

1764 reads, 49 reads per million, 3 experiments
AAAUCUCUGCUGGCAAAUGUGGugucacgguagcaaucgcACAAUUACCUGUAGAGAUUCUG
.(((((((((.((.((.((((..((..(....)..))..)))).)).)).)))))))))...

Structure
--A         U  C  A    Gu  ca g 
   AAUCUCUGC GG AA UGUG  gu  c g
   ||||||||| || || ||||  ||  |  
   UUAGAGAUG CC UU ACAc  ua  g u
GUC         U  A  A    gc  ac a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Ultra56: 1124133-1124194 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from oan-mir-216b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oan-miR-216b-5p

Accession MIMAT0029020
Description Ornithorhynchus anatinus oan-miR-216b-5p mature miRNA
Sequence 1 - AAAUCUCUGCUGGCAAAUGUGG - 22
Evidence experimental
Illumina [1]

Mature oan-miR-216b-3p

Accession MIMAT0029021
Description Ornithorhynchus anatinus oan-miR-216b-3p mature miRNA
Sequence 41 - ACAAUUACCUGUAGAGAUUCUG - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45