miRBase entry: mdo-mir-7398h

Stem-loop mdo-mir-7398h


Accession
MI0024038
Description
Monodelphis domestica mdo-mir-7398h precursor miRNA
Gene family
MIPF0001643; mir-7398


Sequence

51 reads, 2 reads per million, 3 experiments
UGUGUGAAAAGGGGUGAGGGUACUgugcacuauugggUAACCCUCCCUUCUUUCACAGU
..(((((((.((((.(((((((((...........))).)))))))))).)))))))..

Structure
UG       A    U      -   gugc 
  UGUGAAA GGGG GAGGGU ACU    a
  ||||||| |||| |||||| |||    c
  ACACUUU UUCC CUCCCA Ugg    u
UG       C    -      A   guua 


Annotation confidence Not enough data
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Genome context
chrX: 57311982-57312040 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from mdo-mir-7398h
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7398h-5p

Accession MIMAT0028932
Description Monodelphis domestica mdo-miR-7398h-5p mature miRNA
Sequence 1 - UGUGUGAAAAGGGGUGAGGGUACU - 24
Evidence experimental
Illumina [1]

Mature mdo-miR-7398h-3p

Accession MIMAT0028933
Description Monodelphis domestica mdo-miR-7398h-3p mature miRNA
Sequence 38 - UAACCCUCCCUUCUUUCACAGU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45