miRBase entry: mdo-mir-7398e

Stem-loop mdo-mir-7398e


Accession
MI0024015
Description
Monodelphis domestica mdo-mir-7398e precursor miRNA
Gene family
MIPF0001643; mir-7398


Sequence

407 reads, 7 reads per million, 5 experiments
AGUGUAGAGAAGGGUGAAAAUGCuguguucugucaggUAAUUCUCCCUUCUCUUACUGU
((((.(((((((((.(((....(((........)))....))).)))))))))))))..

Structure
--    U         U   AAUG   ugu 
  AGUG AGAGAAGGG GAA    Cug   u
  |||| ||||||||| |||    |||    
  UCAU UCUCUUCCC CUU    gac   c
UG    -         U   AAUg   ugu 


Annotation confidence Not enough data
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Genome context
chrX: 57276306-57276364 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from mdo-mir-7398e
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7398e-5p

Accession MIMAT0028896
Description Monodelphis domestica mdo-miR-7398e-5p mature miRNA
Sequence 1 - AGUGUAGAGAAGGGUGAAAAUGC - 23
Evidence experimental
Illumina [1]

Mature mdo-miR-7398e-3p

Accession MIMAT0028897
Description Monodelphis domestica mdo-miR-7398e-3p mature miRNA
Sequence 38 - UAAUUCUCCCUUCUCUUACUGU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45