miRBase entry: mdo-mir-7388c

Stem-loop mdo-mir-7388c


Accession
MI0024002
Description
Monodelphis domestica mdo-mir-7388c precursor miRNA


Sequence

25 reads, 4 reads per million, 2 experiments
UGCACAGACGUGACAUUUUAugucuuaugauuaAAAUAGUCACCUUUUGUGUAAC
((((((((.(((((((((((.(((....))))))))).)))))..))))))))..

Structure
--        -C     -      u   u 
  UGCACAGA  GUGAC AUUUUA guc u
  ||||||||  ||||| |||||| |||  
  AUGUGUUU  CACUG UAAAau uag a
CA        UC     A      -   u 


Annotation confidence Not enough data
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Genome context
chrX: 40516906-40516960 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from mdo-mir-7388c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7388c-5p

Accession MIMAT0028874
Description Monodelphis domestica mdo-miR-7388c-5p mature miRNA
Sequence 1 - UGCACAGACGUGACAUUUUA - 20
Evidence experimental
Illumina [1]

Mature mdo-miR-7388c-3p

Accession MIMAT0028875
Description Monodelphis domestica mdo-miR-7388c-3p mature miRNA
Sequence 34 - AAAUAGUCACCUUUUGUGUAAC - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45