Stem-loop mdo-mir-7388b

Accession

MI0024001

Description

Monodelphis domestica mdo-mir-7388b precursor miRNA

Sequence

1447 reads, 67 reads per million, 5 experiments

UGUUGCACAGAUGUUACAUUUuauguaugcugauaaaAUAGUCCCAUCAUGUGCAACAGU
(((((((((((((..(((((((((........))))))).))..)))).)))))))))..

Structure

--         -    UU  -       gua 
  UGUUGCACA GAUG  AC AUUUuau   u
  ||||||||| ||||  || |||||||    
  ACAACGUGU CUAC  UG UAaaaua   g
UG         A    CC  A       guc 

Annotation confidence Not enough data

Genome context

chrX: 40516163-40516222 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from mdo-mir-7388b

Mature mdo-miR-7388b-5p

• Accession: MIMAT0028872
• Description: Monodelphis domestica mdo-miR-7388b-5p mature miRNA
• Sequence: 1 - UGUUGCACAGAUGUUACAUUU - 21
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7388b-3p

• Accession: MIMAT0028873
• Description: Monodelphis domestica mdo-miR-7388b-3p mature miRNA
• Sequence: 38 - AUAGUCCCAUCAUGUGCAACAGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45