miRBase entry: mdo-mir-7386o

Stem-loop mdo-mir-7386o


Accession
MI0023997
Description
Monodelphis domestica mdo-mir-7386o precursor miRNA


Sequence

30527 reads, 1159 reads per million, 5 experiments
UGUGGACACAGUCCUUCAUUUUguuaauuuugugaAAAGAAGGAUCGUGUCCAUAGA
(((((((((.(((((((.((((............))))))))))).)))))))))..

Structure
--         A       A    guuaa 
  UGUGGACAC GUCCUUC UUUU     u
  ||||||||| ||||||| ||||      
  AUACCUGUG UAGGAAG AAAa     u
AG         C       -    guguu 


Annotation confidence Not enough data
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Genome context
chrX: 40504972-40505028 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from mdo-mir-7386o
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7386o-5p

Accession MIMAT0028866
Description Monodelphis domestica mdo-miR-7386o-5p mature miRNA
Sequence 1 - UGUGGACACAGUCCUUCAUUUU - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-7386o-3p

Accession MIMAT0028867
Description Monodelphis domestica mdo-miR-7386o-3p mature miRNA
Sequence 36 - AAAGAAGGAUCGUGUCCAUAGA - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45