Stem-loop mdo-mir-7386c

Accession

MI0023985

Description

Monodelphis domestica mdo-mir-7386c precursor miRNA

Gene family

MIPF0001658; mir-7386

Sequence

330 reads, 25 reads per million, 5 experiments

CACUUGGAUGAGGCGCACUAUuuugugaauacugccaaaauAAUGACCUUAUCCAAGGAG
..(((((((((((..((.(((((((.(.......)))))))).)).)))))))))))...

Structure

-CA           CG  C       u aa 
   CUUGGAUGAGG  CA UAUuuug g  u
   |||||||||||  || ||||||| |  a
   GAACCUAUUCC  GU Auaaaac c  c
GAG           -A  A       - gu 

Annotation confidence Not enough data

Genome context

chrX: 40478197-40478256 [+]

Clustered miRNAs

18 other miRNAs are < 10 kb from mdo-mir-7386c

Mature mdo-miR-7386c-5p

• Accession: MIMAT0028842
• Description: Monodelphis domestica mdo-miR-7386c-5p mature miRNA
• Sequence: 1 - CACUUGGAUGAGGCGCACUAU - 21
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7386c-3p

• Accession: MIMAT0028843
• Description: Monodelphis domestica mdo-miR-7386c-3p mature miRNA
• Sequence: 42 - AAUGACCUUAUCCAAGGAG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45