miRBase entry: mdo-mir-19b-2

Stem-loop mdo-mir-19b-2


Accession
MI0023937
Description
Monodelphis domestica mdo-mir-19b-2 precursor miRNA
Gene family
MIPF0000011; mir-19


Sequence

3861 reads, 79 reads per million, 5 experiments
AGUUUUGCAGGUCUUGCAUCGGCcuaugucaauugcUGUGCAAAUCCAUGCAAAACUGA
(((((((((((..(((((.((((..((....)).)))))))))..)).)))))))))..

Structure
--         -  UC     U    cu  g 
  AGUUUUGCA GG  UUGCA CGGC  au u
  ||||||||| ||  ||||| ||||  ||  
  UCAAAACGU CC  AACGU GUcg  ua c
AG         A  UA     -    -u  a 


Annotation confidence High
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Genome context
chrX: 35202389-35202447 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from mdo-mir-19b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-19b-3p

Accession MIMAT0004170
Description Monodelphis domestica mdo-miR-19b-3p mature miRNA
Sequence 37 - UGUGCAAAUCCAUGCAAAACUGA - 59
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mdo-miR-19b-2-5p

Accession MIMAT0031025
Description Monodelphis domestica mdo-miR-19b-2-5p mature miRNA
Sequence 1 - AGUUUUGCAGGUCUUGCAUCGGC - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45