Stem-loop mdo-mir-1544b

Accession

MI0023916

Description

Monodelphis domestica mdo-mir-1544b precursor miRNA

Gene family

MIPF0001645; mir-1544

Sequence

3435 reads, 63 reads per million, 5 experiments

ACACCCAGGGAUAGAACAGCAGuucacuuugaaguccCCUUUUCUAUCCCUGGUACCAG
....((((((((((((.((.(.((((...)))).)...)).))))))))))))......

Structure

--ACAC            C  --C G    c 
      CCAGGGAUAGAA AG   A uuca  
      |||||||||||| ||   | |||| u
      GGUCCCUAUCUU UC   u aagu  
GACCAU            U  Ccc g    u 

Annotation confidence Not enough data

Genome context

chrX: 13923740-13923798 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from mdo-mir-1544b

Mature mdo-miR-1544b-5p

• Accession: MIMAT0028744
• Description: Monodelphis domestica mdo-miR-1544b-5p mature miRNA
• Sequence: 1 - ACACCCAGGGAUAGAACAGCAG - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-1544b-3p

• Accession: MIMAT0028745
• Description: Monodelphis domestica mdo-miR-1544b-3p mature miRNA
• Sequence: 38 - CCUUUUCUAUCCCUGGUACCAG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45