miRBase entry: mdo-mir-873

Stem-loop mdo-mir-873


Accession
MI0023856
Description
Monodelphis domestica mdo-mir-873 precursor miRNA
Gene family
MIPF0000390; mir-873


Sequence

2279 reads, 74 reads per million, 5 experiments
UGCAGGAACUUGUGAGUCUCCuauugaaaaugaacgggAGACUGGUGAGUUCCCGGGAA
(.(.(((((((((.((((((((.((.......)).)))))))).))))))))).).)..

Structure
-- G A         G        a  ga 
  U C GGAACUUGU AGUCUCCu uu  a
  | | ||||||||| |||||||| ||  a
  G G CCUUGAGUG UCAGAggg aa  a
AA G C         G        c  gu 


Annotation confidence High
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Genome context
chr6: 46253223-46253281 [-]

Database links

Mature mdo-miR-873-5p

Accession MIMAT0028664
Description Monodelphis domestica mdo-miR-873-5p mature miRNA
Sequence 1 - UGCAGGAACUUGUGAGUCUCC - 21
Evidence experimental
Illumina [1]

Mature mdo-miR-873-3p

Accession MIMAT0028665
Description Monodelphis domestica mdo-miR-873-3p mature miRNA
Sequence 39 - AGACUGGUGAGUUCCCGGGAA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45