miRBase entry: mdo-mir-193b

Stem-loop mdo-mir-193b


Accession
MI0023850
Description
Monodelphis domestica mdo-mir-193b precursor miRNA
Gene family
MIPF0000082; mir-193


Sequence

1319 reads, 26 reads per million, 5 experiments
CGGGGUUUUGAGGGCGAGAUGAguuuauguuuuauccAACUGGCCCACAAAGUCCCGCU
((((((((((.((((.((.((.((.........)).)).)).)))).))))))))))..

Structure
--          A    G  A  A  uua 
  CGGGGUUUUG GGGC AG UG gu   u
  |||||||||| |||| || || ||   g
  GCCCUGAAAC CCCG UC Ac ua   u
UC          A    G  A  c  uuu 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chr6: 108685053-108685111 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-193b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-193b-5p

Accession MIMAT0028652
Description Monodelphis domestica mdo-miR-193b-5p mature miRNA
Sequence 1 - CGGGGUUUUGAGGGCGAGAUGA - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-193b-3p

Accession MIMAT0028653
Description Monodelphis domestica mdo-miR-193b-3p mature miRNA
Sequence 38 - AACUGGCCCACAAAGUCCCGCU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45