Stem-loop mdo-mir-181b-3

Accession

MI0023796

Description

Monodelphis domestica mdo-mir-181b-3 precursor miRNA

Gene family

MIPF0000007; mir-181

Sequence

132727 reads, 2336 reads per million, 5 experiments

AACAUUCAUUGCUGUCGGUGGGUugugagaucugaggaaaaacUCACCGAUGGAUGAAUGUCAC
.((((((((..(((((((((((((................)))))))))))))))))))))...

Structure

--A        UG             gugagau 
   ACAUUCAU  CUGUCGGUGGGUu       c
   ||||||||  |||||||||||||        
   UGUAAGUA  GGUAGCCACUcaa       u
CAC        --             aaaggag 

Annotation confidence High

Genome context

chr3: 446461129-446461192 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mdo-mir-181b-3

Mature mdo-miR-181b-5p

• Accession: MIMAT0004155
• Description: Monodelphis domestica mdo-miR-181b-5p mature miRNA
• Sequence: 1 - AACAUUCAUUGCUGUCGGUGGGU - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-181b-3-3p

• Accession: MIMAT0031048
• Description: Monodelphis domestica mdo-miR-181b-3-3p mature miRNA
• Sequence: 44 - UCACCGAUGGAUGAAUGUCAC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45