miRBase entry: mdo-mir-196a

Stem-loop mdo-mir-196a


Accession
MI0023764
Description
Monodelphis domestica mdo-mir-196a precursor miRNA
Gene family
MIPF0000031; mir-196


Sequence

62341 reads, 1279 reads per million, 5 experiments
UAGGUAGUUUCCUGUUGUUGGGccuagauuucuaaacaCAAGAACAUCAAACCACCUGAU
(((((.((((..((((.(((....(((....)))....))).))))..)))).)))))..

Structure
--     A    CC    G   GGcc   a 
  UAGGU GUUU  UGUU UUG    uag u
  ||||| ||||  |||| |||    |||  
  GUCCA CAAA  ACAA AAC    auc u
UA     C    CU    G   acaa   u 


Annotation confidence High
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Genome context
chr2: 201215985-201216044 [-]

Database links

Mature mdo-miR-196a-5p

Accession MIMAT0028494
Description Monodelphis domestica mdo-miR-196a-5p mature miRNA
Sequence 1 - UAGGUAGUUUCCUGUUGUUGGG - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-196a-3p

Accession MIMAT0028495
Description Monodelphis domestica mdo-miR-196a-3p mature miRNA
Sequence 39 - CAAGAACAUCAAACCACCUGAU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45