miRBase entry: mml-mir-549b

Stem-loop mml-mir-549b


Accession
MI0023682
Description
Macaca mulatta mml-mir-549b precursor miRNA
Gene family
MIPF0000470; mir-549


Sequence

40 reads, 1 reads per million, 6 experiments
AGAGCUCAUCCAUAAUUGUCAUgaucugagacaguGACAACUAUGGAUGAGCUCUCA
((((((((((((((.(((((((..((...))..))))))).))))))))))))))..

Structure
--              A       ga  u 
  AGAGCUCAUCCAUA UUGUCAU  uc  
  |||||||||||||| |||||||  || g
  UCUCGAGUAGGUAU AACAGug  ag  
AC              C       ac  a 


Annotation confidence Not enough data
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Genome context
chr7: 58404331-58404387 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-mir-549b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-549b-5p

Accession MIMAT0028344
Description Macaca mulatta mml-miR-549b-5p mature miRNA
Sequence 1 - AGAGCUCAUCCAUAAUUGUCAU - 22
Evidence experimental
Illumina [1]

Mature mml-miR-549b-3p

Accession MIMAT0028345
Description Macaca mulatta mml-miR-549b-3p mature miRNA
Sequence 36 - GACAACUAUGGAUGAGCUCUCA - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45