miRBase entry: gga-mir-196-4

Stem-loop gga-mir-196-4


Accession
MI0023559
Description
Gallus gallus gga-mir-196-4 precursor miRNA
Gene family
MIPF0000031; mir-196

Literature search
6 open access papers mention gga-mir-196-4
(9 sentences)

Sequence

134454 reads, 1901 reads per million, 5 experiments
aacugcucugugguuUAGGUAGUUUCAUGUUGUUGGggcuccaccuuucucucuacagcacgaaacugccuuaauuacuucaguugauaucauc
(((((....((((((.((((((((((.((((((.((((...........)))).)))))).)))))))))).))))))..))))).........

Structure
---------     cucu      U          A      U    cucc 
         aacug    gugguu AGGUAGUUUC UGUUGU GGgg    a
         |||||    |||||| |||||||||| |||||| ||||    c
         uugac    cauuaa uccgucaaag acgaca cucu    c
cuacuauag     --uu      u          c      u    cuuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature gga-miR-196-5p

Accession MIMAT0001121
Description Gallus gallus gga-miR-196-5p mature miRNA
Sequence 16 - UAGGUAGUUUCAUGUUGUUGG - 36
Evidence experimental
cloned [2]
Database links
Predicted targets

References

  1. PubMed ID: 15592404
    Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
    "International Chicken Genome Sequencing Consortium"
    "Nature (2004) 432:695-716


  2. "McBride D, Carre W, Law A, Clinton M"
    (None) None: