miRBase entry: sbi-MIR6232a

Stem-loop sbi-MIR6232a


Accession
MI0023535
Description
Sorghum bicolor sbi-MIR6232a precursor miRNA


Sequence

guagauacauagcuuuuacucuguuccgaauuauaaGUCGCUUUGACUUUUUUGGUACAUcgauuuugcuauguaucuagacauguuguuauaucuagauacauagcaaagUGGAUGUACCAAAAAAGUCAAAGCggcuuauaauuuggaacggagggaguacuauguucguugc
...((.((((((..((..(((((((((((((((((((((((((((((((((((((((((((.(((((((((((((((((((.(((....))).))))))))))))))))))).)))))))))))))))))))))))))))))))))))))))))))..))..)))))))).....

Structure
--gua  u      cu  ua                                           g                   c   u 
     ga acauag  uu  cucuguuccgaauuauaaGUCGCUUUGACUUUUUUGGUACAUc auuuugcuauguaucuaga aug u
     || ||||||  ||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||  
     cu uguauc  ga  gaggcaagguuuaauauucggCGAAACUGAAAAAACCAUGUAG Ugaaacgauacauagaucu uau g
cguug  -      au  gg                                           G                   a   u 


Annotation confidence Not enough data
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Genome context
chr2: 206794-206968 [-]

Database links

Mature sbi-miR6232a-5p

Accession MIMAT0026444
Description Sorghum bicolor sbi-miR6232a-5p mature miRNA
Sequence 37 - GUCGCUUUGACUUUUUUGGUACAU - 60
Evidence not_experimental

Mature sbi-miR6232a-3p

Accession MIMAT0026445
Description Sorghum bicolor sbi-miR6232a-3p mature miRNA
Sequence 112 - UGGAUGUACCAAAAAAGUCAAAGC - 135
Evidence not_experimental

References

  1. PubMed ID: 22747909
    Computational identification and analysis of novel sugarcane microRNAs
    Thiebaut F, Grativol C, Carnavale-Bottino M, Rojas CA, Tanurdzic M, Farinelli L, Martienssen RA, Hemerly AS, Ferreira PC
    BMC Genomics (2012) 13:290