Stem-loop sbi-MIR6222

Accession

MI0023518

Description

Sorghum bicolor sbi-MIR6222 precursor miRNA

Sequence

aacucuguCCUGUUUGGAUCAGCCAAGGCucguuauuauuagcuaauuuuuagcccaagcuaauaacuagaaCUAGCUGAUCCAAACAGGCCCuuaguu
((((..(.(((((((((((((((...((.((....(((((((((.............)))))))))...)).)).)))))))))))))))..)..))))

Structure

    cu -u               CAA  C  guua         aauuu 
aacu  g  CCUGUUUGGAUCAGC   GG uc    uuauuagcu     u
||||  |  |||||||||||||||   || ||    |||||||||     u
uuga  C  GGACAAACCUAGUCG   UC ag    aauaaucga     a
    uu CC               --A  a  -auc         acccg 

Annotation confidence Not enough data

Genome context

chr1: 47702108-47702206 [-]

Mature sbi-miR6222-5p

• Accession: MIMAT0026410
• Description: Sorghum bicolor sbi-miR6222-5p mature miRNA
• Sequence: 9 - CCUGUUUGGAUCAGCCAAGGC - 29
• Evidence: not_experimental

Mature sbi-miR6222-3p

• Accession: MIMAT0026411
• Description: Sorghum bicolor sbi-miR6222-3p mature miRNA
• Sequence: 73 - CUAGCUGAUCCAAACAGGCCC - 93
• Evidence: not_experimental

References

1. PubMed ID: 22747909
   Computational identification and analysis of novel sugarcane microRNAs
   Thiebaut F, Grativol C, Carnavale-Bottino M, Rojas CA, Tanurdzic M, Farinelli L, Martienssen RA, Hemerly AS, Ferreira PC
   BMC Genomics (2012) 13:290