miRBase entry: bma-mir-5851

Stem-loop bma-mir-5851


Accession
MI0023449
Description
Brugia malayi bma-mir-5851 precursor miRNA


Sequence

gucugaguaucauacaugcagugaauugucucaagcauauacagcccugaUUCGCAAUUCAUGGAUGUAUgcuacucaga
.((((((((.(((((((.((.((((((((.(((.((.......))..)))...)))))))))).))))))).))))))))

Structure
g        u       g  g        --c   -a  au 
 ucugagua cauacau ca ugaauugu   uca  gc  a
 |||||||| ||||||| || ||||||||   |||  ||  u
 agacucau gUAUGUA GU ACUUAACG   agu  cg  a
-        c       G  -        CUU   cc  ac 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
This microRNA was experimentally validated from deep sequencing libraries in the closely related species Brugia pahangi [1].

Genome context
Bmal_v3_scaffold256: 14564-14643 [+]

Database links

Mature bma-miR-5851

Accession MIMAT0026349
Description Brugia malayi bma-miR-5851 mature miRNA
Sequence 51 - UUCGCAAUUCAUGGAUGUAU - 70
Evidence not_experimental

References

  1. PubMed ID: 22216965
    Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
    Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
    BMC Genomics (2012) 13:4