miRBase entry: ccr-mir-124b

Stem-loop ccr-mir-124b


Accession
MI0023430
Description
Cyprinus carpio ccr-mir-124b precursor miRNA
Gene family
MIPF0000021; mir-124

Literature search
3 open access papers mention ccr-mir-124b
(8 sentences)

Sequence

aaggccccucucuuggcauucaccgcgugccuuaauuguauggauauuaaaUCAAGGUCCGCCGUGAACACGCagaguggcgggcc
..(((((((((((..(..(((((.(((.(((((.(((..((....))..))).))))).))).)))))..)..)))).)).)))))

Structure
aa     -  -    ug ca     c   u     a   gu  g 
  ggccc cu cucu  g  uucac gcg gccuu auu  au g
  ||||| || ||||  |  ||||| ||| ||||| |||  ||  
  ccggg gg gaga  C  AAGUG CGC UGGAA Uaa  ua a
--     c  u    CG AC     C   C     C   au  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-124b

Accession MIMAT0026334
Description Cyprinus carpio ccr-miR-124b mature miRNA
Sequence 52 - UCAAGGUCCGCCGUGAACACGC - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925