miRBase entry: ccr-mir-92b

Stem-loop ccr-mir-92b


Accession
MI0023420
Description
Cyprinus carpio ccr-mir-92b precursor miRNA
Gene family
MIPF0000013; mir-25

Literature search
1 open access papers mention ccr-mir-92b
(1 sentences)

Sequence

guguguuuguagucccgcggucuggcaggugugggauguugugcacuguuguucaaucucccgccaaUAUUGCACUCGUCCCGGCCUCCcugaccacgaggaacacgc
((((((......(((((.((((.((.((((.(((((((..(((((.(((((.............))))).))))).))))))))))).)).)))).)).)))))))))

Structure
      uuguag   -  c    u  c    g       uu     c     uucaa 
gugugu      ucc cg gguc gg aggu ugggaug  gugca uguug     u
||||||      ||| || |||| || |||| |||||||  ||||| |||||     c
cgcaca      agg gc ccag cC UCCG GCCCUGC  CACGU AUaac     u
      ------   a  a    u  C    -       -U     U     cgccc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-92b

Accession MIMAT0026324
Description Cyprinus carpio ccr-miR-92b mature miRNA
Sequence 68 - UAUUGCACUCGUCCCGGCCUCC - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925