Stem-loop ccr-mir-459

Accession

MI0023404

Description

Cyprinus carpio ccr-mir-459 precursor miRNA

Gene family

MIPF0001322; mir-459

Sequence

ucugaccucuugcucucAGUAACAAGGAUUCAUCCUGUUguggaacacaaauccaaCAGGGAAUCUCUGUUACUGGGgucaagguucag
.((((.(.((((.(((((((((((.((((((..(((((((.((........))))))))))))))).))))))))))).))))).))))

Structure

u    c u    c           A      AU       u  aac 
 cuga c cuug ucucAGUAACA GGAUUC  CCUGUUg gg   a
 |||| | |||| ||||||||||| ||||||  ||||||| ||    
 gacu g gaac gGGGUCAUUGU UCUAAG  GGACaac cu   c
-    u -    u           C      --       -  aaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-miR-459-5p

• Accession: MIMAT0026304
• Description: Cyprinus carpio ccr-miR-459-5p mature miRNA
• Sequence: 18 - AGUAACAAGGAUUCAUCCUGUU - 39
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-459-3p

• Accession: MIMAT0026305
• Description: Cyprinus carpio ccr-miR-459-3p mature miRNA
• Sequence: 57 - CAGGGAAUCUCUGUUACUGGG - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925