miRBase entry: ccr-mir-30d

Stem-loop ccr-mir-30d


Accession
MI0023390
Description
Cyprinus carpio ccr-mir-30d precursor miRNA
Gene family
MIPF0000005; mir-30

Literature search
3 open access papers mention ccr-mir-30d
(9 sentences)

Sequence

uucaugugcugguuguucaugccUGUAAACAUCCCCGACUGGAAGCugugcuguacgcaaaacaagcuuucaguuggauguuugcugccaucguccaguucuuucg
.....(.(((((.((.....((..((((((((((..(((((((((((((..((....))..)).))))))))))))))))))))).))...)).))))).).....

Structure
uucau u     u  uucau  cU          CC           -  gc  u 
     g gcugg ug     gc  GUAAACAUCC  GACUGGAAGCu gu  ug a
     | ||||| ||     ||  ||||||||||  ||||||||||| ||  ||  
     c ugacc gc     cg  cguuuguagg  uugacuuucga ca  ac c
gcuuu u     u  --uac  -u          --           a  aa  g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-30d

Accession MIMAT0026290
Description Cyprinus carpio ccr-miR-30d mature miRNA
Sequence 24 - UGUAAACAUCCCCGACUGGAAGC - 46
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925