miRBase entry: ccr-mir-30b

Stem-loop ccr-mir-30b


Accession
MI0023389
Description
Cyprinus carpio ccr-mir-30b precursor miRNA
Gene family
MIPF0000005; mir-30

Literature search
3 open access papers mention ccr-mir-30b
(9 sentences)

Sequence

uaauauuccaguguagucguUGUAAACAUCCUACACUCAGCUguaaucugcacaugaggcugggaggaggguguuugcugugacugacuggagcuccuc
.....(((((((.((((((..(((((((((((...(((((((...............)))))))...)))))))))))..)))))))))))))......

Structure
-uaaua       g      uU           ACA       guaauc 
      uuccagu uagucg  GUAAACAUCCU   CUCAGCU      u
      ||||||| ||||||  |||||||||||   |||||||      g
      gagguca gucagu  cguuuguggga   gggucgg      c
cuccuc       -      gu           gga       aguaca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-30b

Accession MIMAT0026289
Description Cyprinus carpio ccr-miR-30b mature miRNA
Sequence 21 - UGUAAACAUCCUACACUCAGCU - 42
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925