miRBase entry: ccr-mir-222

Stem-loop ccr-mir-222


Accession
MI0023375
Description
Cyprinus carpio ccr-mir-222 precursor miRNA
Gene family
MIPF0000051; mir-221

Literature search
1 open access papers mention ccr-mir-222
(6 sentences)

Sequence

gacguccauccuucgcucaguggucaguguagguccugucuccgccagcAGCUACAUCUGGCUACUGGGucucugauggccguc
((((.(((((....((((((((((((((((((.(.(((.......))).).))))).)))))))))))))....))))).))))

Structure
    u     cuuc             -     g c   uc 
gacg ccauc    gcucaguggucag uguag u cug  u
|||| |||||    ||||||||||||| ||||| | |||  c
cugc gguag    uGGGUCAUCGGUC ACAUC A gac  c
    c     ucuc             U     G c   cg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-222

Accession MIMAT0026274
Description Cyprinus carpio ccr-miR-222 mature miRNA
Sequence 50 - AGCUACAUCUGGCUACUGGG - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925